Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 LIN28AP1-201ENST00000429574 405 ntBASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 AC010203.1-204ENST00000548782 407 ntBASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 AP000692.2-201ENST00000608391 879 ntBASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 CRYGFP-201ENST00000418459 633 ntBASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 AC092720.2-201ENST00000602388 1665 ntBASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA3Q9Y5H0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA3Q9Y5H0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA3Q9Y5H0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA3Q9Y5H0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA3Q9Y5H0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PCDHGA3Q9Y5H0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHGA3Q9Y5H0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA3Q9Y5H0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 ATP5G1P1-201ENST00000448724 379 ntBASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA3Q9Y5H0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 AC116562.4-201ENST00000641316 2276 ntBASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGA3Q9Y5H0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA3Q9Y5H0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA3Q9Y5H0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PCDHGA3Q9Y5H0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA3Q9Y5H0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA3Q9Y5H0 RCC2P6-201ENST00000526625 1557 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms