Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB13Q9Y5F0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHB13Q9Y5F0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB13Q9Y5F0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDHB13Q9Y5F0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB13Q9Y5F0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB13Q9Y5F0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB13Q9Y5F0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PCDHB13Q9Y5F0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB13Q9Y5F0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB13Q9Y5F0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 TSPY21P-201ENST00000433481 731 ntBASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB13Q9Y5F0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 AC113410.3-201ENST00000623366 203 ntBASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB13Q9Y5F0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 AC004951.3-201ENST00000418645 1148 ntBASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB13Q9Y5F0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 RCC2P6-201ENST00000526625 1557 ntBASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB13Q9Y5F0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms