Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB9Q9Y5E1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 AC026271.3-201ENST00000571884 352 ntBASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 SDHAP1-207ENST00000440850 2000 ntBASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 Z82202.1-201ENST00000623446 1880 ntBASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHB9Q9Y5E1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 AC073508.3-201ENST00000619697 1419 ntBASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 AC007952.6-201ENST00000573168 2673 ntBASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 AC003957.1-201ENST00000625108 2673 ntBASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 Z85996.1-201ENST00000494644 937 ntBASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PCDHB9Q9Y5E1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 AC093484.2-201ENST00000580996 2166 ntBASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 C2orf69P3-201ENST00000565542 1120 ntBASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB9Q9Y5E1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB9Q9Y5E1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms