Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH1Q9Y2L9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 AC027612.3-201ENST00000413684 1047 ntBASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH1Q9Y2L9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 AC012317.2-201ENST00000623305 2251 ntBASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 YBX1P1-201ENST00000445822 960 ntBASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH1Q9Y2L9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 AL162741.1-201ENST00000565563 1558 ntBASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 AC105233.4-201ENST00000642045 216 ntBASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 AC134043.2-201ENST00000624206 2238 ntBASIC18.17■□□□□ 0.5
LRCH1Q9Y2L9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 AC011270.2-201ENST00000624293 2550 ntBASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms