Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 UPK3BP1-201ENST00000428678 509 ntBASIC18.72■□□□□ 0.59
SATB2Q9UPW6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 AL358472.4-201ENST00000633140 710 ntBASIC18.72■□□□□ 0.59
SATB2Q9UPW6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SATB2Q9UPW6 AC018553.1-201ENST00000616682 1458 ntBASIC18.71■□□□□ 0.59
SATB2Q9UPW6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.71■□□□□ 0.59
SATB2Q9UPW6 AC063952.2-201ENST00000498792 1227 ntBASIC18.71■□□□□ 0.59
SATB2Q9UPW6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.71■□□□□ 0.59
SATB2Q9UPW6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
SATB2Q9UPW6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 KRT16P6-202ENST00000425692 1426 ntBASIC18.7■□□□□ 0.58
SATB2Q9UPW6 AC117947.1-201ENST00000427448 529 ntBASIC18.7■□□□□ 0.58
SATB2Q9UPW6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 AL020996.1-203ENST00000536896 2307 ntBASIC18.7■□□□□ 0.58
SATB2Q9UPW6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 AC091076.1-201ENST00000610741 619 ntBASIC18.7■□□□□ 0.58
SATB2Q9UPW6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SATB2Q9UPW6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 LETM1P2-201ENST00000597330 2178 ntBASIC18.69■□□□□ 0.58
SATB2Q9UPW6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 HMGA1P5-201ENST00000412453 271 ntBASIC18.69■□□□□ 0.58
SATB2Q9UPW6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 AP000692.2-201ENST00000608391 879 ntBASIC18.69■□□□□ 0.58
SATB2Q9UPW6 AC011298.2-201ENST00000617989 482 ntBASIC18.69■□□□□ 0.58
SATB2Q9UPW6 AC130371.2-201ENST00000619443 611 ntBASIC18.69■□□□□ 0.58
SATB2Q9UPW6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.69■□□□□ 0.58
SATB2Q9UPW6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SATB2Q9UPW6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.68■□□□□ 0.58
SATB2Q9UPW6 RCC2P6-201ENST00000526625 1557 ntBASIC18.68■□□□□ 0.58
SATB2Q9UPW6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SATB2Q9UPW6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SATB2Q9UPW6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.68■□□□□ 0.58
SATB2Q9UPW6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms