Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA4Q9UN74 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA4Q9UN74 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 FP475955.4-201ENST00000623131 1990 ntBASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA4Q9UN74 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHA4Q9UN74 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHA4Q9UN74 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
PCDHA4Q9UN74 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 RBM17P1-201ENST00000453646 1190 ntBASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDHA4Q9UN74 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 AL355075.4-201ENST00000554988 638 ntBASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 CKBP1-201ENST00000565489 1086 ntBASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA4Q9UN74 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 AC096733.2-201ENST00000609937 1394 ntBASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHA4Q9UN74 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms