Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDHA7Q9UN72 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.77■■□□□ 1.08
PCDHA7Q9UN72 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA7Q9UN72 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PCDHA7Q9UN72 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA7Q9UN72 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA7Q9UN72 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA7Q9UN72 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHA7Q9UN72 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHA7Q9UN72 NBPF21P-201ENST00000425093 1451 ntBASIC21.77■■□□□ 1.07
PCDHA7Q9UN72 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHA7Q9UN72 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHA7Q9UN72 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 HLA-L-209ENST00000420110 1011 ntBASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA7Q9UN72 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 PRKY-204ENST00000533551 1019 ntBASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHA7Q9UN72 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 C1QL1P1-201ENST00000568105 661 ntBASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA7Q9UN72 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 AL160286.2-201ENST00000567150 934 ntBASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 AC233263.1-201ENST00000578059 224 ntBASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 MTDHP1-201ENST00000605323 784 ntBASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA7Q9UN72 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHA7Q9UN72 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHA7Q9UN72 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHA7Q9UN72 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms