Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 KRT16P5-201ENST00000455284 522 ntBASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS29Q9UBQ0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 RNF165-205ENST00000588679 2904 ntBASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 TSPY21P-201ENST00000433481 731 ntBASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 RN7SL471P-201ENST00000580476 299 ntBASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS29Q9UBQ0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.33■□□□□ 0.53
VPS29Q9UBQ0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS29Q9UBQ0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
VPS29Q9UBQ0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VPS29Q9UBQ0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS29Q9UBQ0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.33■□□□□ 0.53
VPS29Q9UBQ0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS29Q9UBQ0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS29Q9UBQ0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
VPS29Q9UBQ0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS29Q9UBQ0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 AC133681.1-201ENST00000465482 601 ntBASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 AC124016.1-201ENST00000609552 612 ntBASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS29Q9UBQ0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms