Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXXC1Q9P0U4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CXXC1Q9P0U4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXXC1Q9P0U4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.57■□□□□ 0.88
CXXC1Q9P0U4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 MIR662-201ENST00000384847 95 ntBASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 TOB2P1-201ENST00000469761 992 ntBASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 AL157888.1-201ENST00000631930 593 ntBASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.56■□□□□ 0.88
CXXC1Q9P0U4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 AC012676.1-201ENST00000574705 1949 ntBASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 LINC01711-201ENST00000598340 967 ntBASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.55■□□□□ 0.88
CXXC1Q9P0U4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 AC012615.1-201ENST00000565797 1299 ntBASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 AL136038.4-201ENST00000603606 1261 ntBASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.54■□□□□ 0.88
CXXC1Q9P0U4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 AL391807.1-203ENST00000604392 2365 ntBASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 AC026310.3-201ENST00000625186 2373 ntBASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 AL023284.2-201ENST00000405850 579 ntBASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 KRT16P4-201ENST00000453883 522 ntBASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 AL662844.1-201ENST00000546340 181 ntBASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 HLA-A-201ENST00000376802 1334 ntBASIC20.53■□□□□ 0.88
CXXC1Q9P0U4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.52■□□□□ 0.88
CXXC1Q9P0U4 AL121912.1-201ENST00000603683 238 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms