Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
DNAJC28Q9NX36 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
DNAJC28Q9NX36 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 AP000525.1-201ENST00000608286 694 ntBASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 AC012306.2-201ENST00000609350 630 ntBASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNAJC28Q9NX36 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 AC116351.2-201ENST00000606540 1585 ntBASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 AC010331.1-201ENST00000611423 582 ntBASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 AL032819.2-201ENST00000624543 2162 ntBASIC19.42■□□□□ 0.7
DNAJC28Q9NX36 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 AC018553.1-201ENST00000616682 1458 ntBASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 AC079598.2-202ENST00000546624 1451 ntBASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAJC28Q9NX36 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 MIR1238-201ENST00000408483 83 ntBASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 LINC01465-201ENST00000408887 1940 ntBASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 TFP1-202ENST00000475455 1573 ntBASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAJC28Q9NX36 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DNAJC28Q9NX36 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms