Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.63■□□□□ 0.41
UBQLN4Q9NRR5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 AC120498.9-201ENST00000339021 3867 ntBASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
UBQLN4Q9NRR5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 AC233702.5-201ENST00000584107 538 ntBASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 CD177P1-201ENST00000606252 935 ntBASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
UBQLN4Q9NRR5 FP475955.4-201ENST00000623131 1990 ntBASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 AC004951.3-201ENST00000418645 1148 ntBASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 FAM197Y1-201ENST00000421178 764 ntBASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 AP006294.2-201ENST00000641667 209 ntBASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 BX323043.1-201ENST00000641006 1765 ntBASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
UBQLN4Q9NRR5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 AC018445.3-201ENST00000624177 1945 ntBASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 FEM1AP3-201ENST00000403722 1741 ntBASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 RCC2P6-201ENST00000526625 1557 ntBASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 AL049637.2-201ENST00000641778 930 ntBASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN4Q9NRR5 AL161938.1-201ENST00000569833 2180 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms