Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 AC083849.1-201ENST00000615227 514 ntBASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 AC246785.2-201ENST00000432512 513 ntBASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM7Q9NR12 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 LINC01465-201ENST00000408887 1940 ntBASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 PCDHAC2-203ENST00000615316 3011 ntBASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.47■■□□□ 1.03
PDLIM7Q9NR12 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 ATP5G2P1-201ENST00000433580 426 ntBASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 AC112907.2-201ENST00000448639 330 ntBASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 CA15P1-201ENST00000481698 905 ntBASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 AL160286.2-201ENST00000567150 934 ntBASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.46■■□□□ 1.03
PDLIM7Q9NR12 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 TSPY21P-201ENST00000433481 731 ntBASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 TSPY23P-201ENST00000440136 739 ntBASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 ZNF444P1-201ENST00000559497 298 ntBASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 AC104417.2-201ENST00000562989 1793 ntBASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM7Q9NR12 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PDLIM7Q9NR12 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms