Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AC137761.2-201ENST00000561729 223 ntBASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 AC145350.3-201ENST00000569033 163 ntBASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
C12orf4Q9NQ89 AC141586.5-201ENST00000624546 2050 ntBASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 KRT18P68-201ENST00000392293 1000 ntBASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
C12orf4Q9NQ89 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 PHGDH-210ENST00000641115 1638 ntBASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C12orf4Q9NQ89 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C12orf4Q9NQ89 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms