Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 AL138781.2-201ENST00000617896 1843 ntBASIC18.32■□□□□ 0.52
BRF2Q9HAW0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 POU5F1P3-201ENST00000428824 1078 ntBASIC18.31■□□□□ 0.52
BRF2Q9HAW0 AC128676.1-201ENST00000454392 318 ntBASIC18.31■□□□□ 0.52
BRF2Q9HAW0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 KRT8P41-201ENST00000533985 1514 ntBASIC18.31■□□□□ 0.52
BRF2Q9HAW0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.31■□□□□ 0.52
BRF2Q9HAW0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BRF2Q9HAW0 AC138932.1-201ENST00000534164 6830 ntBASIC18.31■□□□□ 0.52
BRF2Q9HAW0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.3■□□□□ 0.52
BRF2Q9HAW0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 TSPY23P-201ENST00000440136 739 ntBASIC18.3■□□□□ 0.52
BRF2Q9HAW0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 AL353708.3-201ENST00000610272 989 ntBASIC18.3■□□□□ 0.52
BRF2Q9HAW0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 AC093525.10-201ENST00000625130 1569 ntBASIC18.3■□□□□ 0.52
BRF2Q9HAW0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.3■□□□□ 0.52
BRF2Q9HAW0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 NIFKP9-201ENST00000419265 221 ntBASIC18.29■□□□□ 0.52
BRF2Q9HAW0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 Z85996.1-201ENST00000494644 937 ntBASIC18.29■□□□□ 0.52
BRF2Q9HAW0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.29■□□□□ 0.52
BRF2Q9HAW0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms