Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AP000523.1-201ENST00000398242 1049 ntBASIC22.33■■□□□ 1.17
SH2D4AQ9H788 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SH2D4AQ9H788 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SH2D4AQ9H788 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.33■■□□□ 1.17
SH2D4AQ9H788 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.33■■□□□ 1.17
SH2D4AQ9H788 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.33■■□□□ 1.17
SH2D4AQ9H788 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.33■■□□□ 1.16
SH2D4AQ9H788 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
SH2D4AQ9H788 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
SH2D4AQ9H788 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SH2D4AQ9H788 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.33■■□□□ 1.16
SH2D4AQ9H788 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 GUK1-204ENST00000366721 689 ntTSL 3 BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH2D4AQ9H788 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 AIRN-201ENST00000601203 4374 ntBASIC22.31■■□□□ 1.16
SH2D4AQ9H788 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.31■■□□□ 1.16
SH2D4AQ9H788 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.31■■□□□ 1.16
SH2D4AQ9H788 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.31■■□□□ 1.16
SH2D4AQ9H788 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 HOMER2P1-201ENST00000455653 964 ntBASIC22.3■■□□□ 1.16
SH2D4AQ9H788 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 AC140113.3-201ENST00000605663 199 ntBASIC22.3■■□□□ 1.16
SH2D4AQ9H788 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.3■■□□□ 1.16
SH2D4AQ9H788 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 AC011558.1-201ENST00000623459 338 ntBASIC22.29■■□□□ 1.16
SH2D4AQ9H788 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH2D4AQ9H788 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D4AQ9H788 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D4AQ9H788 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D4AQ9H788 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D4AQ9H788 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D4AQ9H788 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D4AQ9H788 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.28■■□□□ 1.16
SH2D4AQ9H788 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D4AQ9H788 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH2D4AQ9H788 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms