Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 LINC01465-201ENST00000408887 1940 ntBASIC17.74■□□□□ 0.43
UBQLN3Q9H347 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 AC093503.3-201ENST00000624917 2352 ntBASIC17.74■□□□□ 0.43
UBQLN3Q9H347 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 AL445675.2-201ENST00000620291 557 ntBASIC17.74■□□□□ 0.43
UBQLN3Q9H347 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.74■□□□□ 0.43
UBQLN3Q9H347 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN3Q9H347 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 KRT16P1-201ENST00000399124 1418 ntBASIC17.72■□□□□ 0.43
UBQLN3Q9H347 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 NUDT16P1-203ENST00000513809 620 ntBASIC17.72■□□□□ 0.43
UBQLN3Q9H347 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 AP003071.4-201ENST00000562276 1284 ntBASIC17.72■□□□□ 0.43
UBQLN3Q9H347 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
UBQLN3Q9H347 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms