Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLPBQ9H078 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLPBQ9H078 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPBQ9H078 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPBQ9H078 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.24■□□□□ 0.67
CLPBQ9H078 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.24■□□□□ 0.67
CLPBQ9H078 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.24■□□□□ 0.67
CLPBQ9H078 AL390955.1-201ENST00000428694 934 ntBASIC19.24■□□□□ 0.67
CLPBQ9H078 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.24■□□□□ 0.67
CLPBQ9H078 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.24■□□□□ 0.67
CLPBQ9H078 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.24■□□□□ 0.67
CLPBQ9H078 ZNF815P-204ENST00000434898 1737 ntBASIC19.24■□□□□ 0.67
CLPBQ9H078 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPBQ9H078 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPBQ9H078 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.24■□□□□ 0.67
CLPBQ9H078 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLPBQ9H078 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLPBQ9H078 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLPBQ9H078 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLPBQ9H078 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLPBQ9H078 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPBQ9H078 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.23■□□□□ 0.67
CLPBQ9H078 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CLPBQ9H078 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
CLPBQ9H078 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPBQ9H078 MESTP1-201ENST00000404287 994 ntBASIC19.23■□□□□ 0.67
CLPBQ9H078 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.23■□□□□ 0.67
CLPBQ9H078 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.23■□□□□ 0.67
CLPBQ9H078 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.23■□□□□ 0.67
CLPBQ9H078 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.23■□□□□ 0.67
CLPBQ9H078 AC010331.1-201ENST00000611423 582 ntBASIC19.23■□□□□ 0.67
CLPBQ9H078 MIR6786-201ENST00000616843 113 ntBASIC19.23■□□□□ 0.67
CLPBQ9H078 AL445675.2-201ENST00000620291 557 ntBASIC19.23■□□□□ 0.67
CLPBQ9H078 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.23■□□□□ 0.67
CLPBQ9H078 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPBQ9H078 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLPBQ9H078 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPBQ9H078 AC005332.7-201ENST00000614046 2005 ntBASIC19.23■□□□□ 0.67
CLPBQ9H078 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.23■□□□□ 0.67
CLPBQ9H078 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPBQ9H078 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPBQ9H078 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPBQ9H078 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CLPBQ9H078 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLPBQ9H078 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.23■□□□□ 0.67
CLPBQ9H078 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLPBQ9H078 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPBQ9H078 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLPBQ9H078 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPBQ9H078 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CLPBQ9H078 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPBQ9H078 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.22■□□□□ 0.67
CLPBQ9H078 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPBQ9H078 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CLPBQ9H078 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.22■□□□□ 0.67
CLPBQ9H078 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.22■□□□□ 0.67
CLPBQ9H078 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.22■□□□□ 0.67
CLPBQ9H078 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.22■□□□□ 0.67
CLPBQ9H078 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLPBQ9H078 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.22■□□□□ 0.67
CLPBQ9H078 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.22■□□□□ 0.67
CLPBQ9H078 AL031985.4-201ENST00000642138 673 ntBASIC19.22■□□□□ 0.67
CLPBQ9H078 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPBQ9H078 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPBQ9H078 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLPBQ9H078 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLPBQ9H078 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPBQ9H078 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLPBQ9H078 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.22■□□□□ 0.67
CLPBQ9H078 CYP2D8P-201ENST00000433633 1490 ntBASIC19.22■□□□□ 0.67
CLPBQ9H078 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.21■□□□□ 0.67
CLPBQ9H078 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.21■□□□□ 0.67
CLPBQ9H078 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLPBQ9H078 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLPBQ9H078 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.21■□□□□ 0.67
CLPBQ9H078 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLPBQ9H078 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 FITM1-202ENST00000559294 800 ntBASIC19.21■□□□□ 0.67
CLPBQ9H078 AC145285.6-201ENST00000604632 637 ntBASIC19.21■□□□□ 0.67
CLPBQ9H078 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.21■□□□□ 0.67
CLPBQ9H078 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPBQ9H078 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.2■□□□□ 0.66
CLPBQ9H078 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLPBQ9H078 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.2■□□□□ 0.66
CLPBQ9H078 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.2■□□□□ 0.66
CLPBQ9H078 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLPBQ9H078 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPBQ9H078 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPBQ9H078 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.2■□□□□ 0.66
CLPBQ9H078 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms