Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 AC005225.4-201ENST00000557330 545 ntBASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 LINC01465-201ENST00000408887 1940 ntBASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 AC127496.7-201ENST00000625110 1798 ntBASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL25A1Q9BXS0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 MIR3917-201ENST00000580971 93 ntBASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 HLA-J-201ENST00000462773 1622 ntBASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 TMEM179-206ENST00000616017 1645 ntBASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.43■□□□□ 0.7
COL25A1Q9BXS0 KRT8P11-201ENST00000409686 1436 ntBASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 RN7SL606P-201ENST00000472779 293 ntBASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 MEIS3P1-201ENST00000495167 958 ntBASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL25A1Q9BXS0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 GUSBP12-201ENST00000513727 720 ntBASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 BNIP3P18-201ENST00000593976 575 ntBASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL25A1Q9BXS0 AC093028.1-201ENST00000622998 982 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms