Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 NME6-213ENST00000451657 871 ntTSL 2 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 AC097658.1-201ENST00000475555 843 ntBASIC11.4□□□□□ -0.58
LIMD2Q9BT23 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 AC106820.2-201ENST00000563775 3264 ntBASIC11.4□□□□□ -0.58
LIMD2Q9BT23 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 ADK-206ENST00000541550 2222 ntTSL 2 BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LIMD2Q9BT23 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LIMD2Q9BT23 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
LIMD2Q9BT23 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
LIMD2Q9BT23 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
LIMD2Q9BT23 AL691432.2-201ENST00000607222 2038 ntBASIC11.4□□□□□ -0.59
LIMD2Q9BT23 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.59
LIMD2Q9BT23 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
LIMD2Q9BT23 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LIMD2Q9BT23 MOK-233ENST00000524214 1539 ntTSL 2 BASIC11.4□□□□□ -0.59
LIMD2Q9BT23 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
LIMD2Q9BT23 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 LBX2-AS1-202ENST00000603175 2083 ntBASIC11.39□□□□□ -0.59
LIMD2Q9BT23 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 DUSP5P2-201ENST00000426873 1033 ntBASIC11.39□□□□□ -0.59
LIMD2Q9BT23 CROCCP5-201ENST00000436658 830 ntBASIC11.39□□□□□ -0.59
LIMD2Q9BT23 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 PPP1R14BP3-201ENST00000509033 445 ntBASIC11.39□□□□□ -0.59
LIMD2Q9BT23 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 AL138781.1-201ENST00000566567 1274 ntBASIC11.39□□□□□ -0.59
LIMD2Q9BT23 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 AL050303.2-201ENST00000619798 666 ntBASIC11.39□□□□□ -0.59
LIMD2Q9BT23 AL121906.2-201ENST00000621597 723 ntBASIC11.39□□□□□ -0.59
LIMD2Q9BT23 OR6D1P-203ENST00000641209 4860 ntBASIC11.39□□□□□ -0.59
LIMD2Q9BT23 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 AC112907.3-201ENST00000577781 2400 ntBASIC11.39□□□□□ -0.59
LIMD2Q9BT23 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.39□□□□□ -0.59
LIMD2Q9BT23 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LIMD2Q9BT23 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 AC079598.2-202ENST00000546624 1451 ntBASIC11.38□□□□□ -0.59
LIMD2Q9BT23 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms