Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2Q9BSQ5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 UNC93B2-201ENST00000285383 730 ntBASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 DGCR10-201ENST00000609839 495 ntBASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 TEX21P-204ENST00000641479 1693 ntBASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 AC141586.3-201ENST00000562166 1838 ntBASIC18.84■□□□□ 0.61
CCM2Q9BSQ5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CCM2Q9BSQ5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCM2Q9BSQ5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCM2Q9BSQ5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCM2Q9BSQ5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCM2Q9BSQ5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCM2Q9BSQ5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.83■□□□□ 0.61
CCM2Q9BSQ5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.83■□□□□ 0.61
CCM2Q9BSQ5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCM2Q9BSQ5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 AP000692.2-201ENST00000608391 879 ntBASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCM2Q9BSQ5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 TSPY23P-201ENST00000440136 739 ntBASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 AL355075.4-201ENST00000554988 638 ntBASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2Q9BSQ5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 RBM17P1-201ENST00000453646 1190 ntBASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 AC087289.5-201ENST00000586076 3175 ntBASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2Q9BSQ5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms