Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.44■□□□□ 0.22
NICN1Q9BSH3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NICN1Q9BSH3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NICN1Q9BSH3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NICN1Q9BSH3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NICN1Q9BSH3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NICN1Q9BSH3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NICN1Q9BSH3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NICN1Q9BSH3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.44■□□□□ 0.22
NICN1Q9BSH3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NICN1Q9BSH3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NICN1Q9BSH3 AC104417.2-201ENST00000562989 1793 ntBASIC16.43■□□□□ 0.22
NICN1Q9BSH3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 AL031598.1-201ENST00000561511 1773 ntBASIC16.43■□□□□ 0.22
NICN1Q9BSH3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NICN1Q9BSH3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 MKRN4P-201ENST00000444706 1521 ntBASIC16.42■□□□□ 0.22
NICN1Q9BSH3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 AL390719.1-204ENST00000412397 1219 ntBASIC16.42■□□□□ 0.22
NICN1Q9BSH3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 AC133552.2-202ENST00000575694 574 ntBASIC16.42■□□□□ 0.22
NICN1Q9BSH3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.42■□□□□ 0.22
NICN1Q9BSH3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 BX276092.2-201ENST00000417668 665 ntBASIC16.41■□□□□ 0.22
NICN1Q9BSH3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 AL162430.1-201ENST00000480705 870 ntBASIC16.41■□□□□ 0.22
NICN1Q9BSH3 RARRES2P6-201ENST00000567333 442 ntBASIC16.41■□□□□ 0.22
NICN1Q9BSH3 AC005829.2-201ENST00000571422 1056 ntBASIC16.41■□□□□ 0.22
NICN1Q9BSH3 AC018470.1-201ENST00000624790 3129 ntBASIC16.41■□□□□ 0.22
NICN1Q9BSH3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NICN1Q9BSH3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms