Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
RAD9AQ99638 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.46■□□□□ 0.87
RAD9AQ99638 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.46■□□□□ 0.87
RAD9AQ99638 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RAD9AQ99638 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.46■□□□□ 0.87
RAD9AQ99638 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
RAD9AQ99638 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RAD9AQ99638 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 IFNL4P1-201ENST00000607083 540 ntBASIC20.46■□□□□ 0.87
RAD9AQ99638 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
RAD9AQ99638 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAD9AQ99638 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RAD9AQ99638 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.46■□□□□ 0.87
RAD9AQ99638 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.46■□□□□ 0.87
RAD9AQ99638 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAD9AQ99638 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.45■□□□□ 0.86
RAD9AQ99638 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAD9AQ99638 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RAD9AQ99638 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RAD9AQ99638 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAD9AQ99638 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RAD9AQ99638 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAD9AQ99638 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAD9AQ99638 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
RAD9AQ99638 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RAD9AQ99638 CHCHD2P8-201ENST00000429873 447 ntBASIC20.45■□□□□ 0.86
RAD9AQ99638 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.45■□□□□ 0.86
RAD9AQ99638 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAD9AQ99638 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.45■□□□□ 0.86
RAD9AQ99638 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAD9AQ99638 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAD9AQ99638 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RAD9AQ99638 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.45■□□□□ 0.86
RAD9AQ99638 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAD9AQ99638 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RAD9AQ99638 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAD9AQ99638 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAD9AQ99638 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
RAD9AQ99638 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAD9AQ99638 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.44■□□□□ 0.86
RAD9AQ99638 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RAD9AQ99638 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAD9AQ99638 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RAD9AQ99638 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAD9AQ99638 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAD9AQ99638 AC093525.10-201ENST00000625130 1569 ntBASIC20.44■□□□□ 0.86
RAD9AQ99638 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAD9AQ99638 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.44■□□□□ 0.86
RAD9AQ99638 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAD9AQ99638 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.44■□□□□ 0.86
RAD9AQ99638 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.44■□□□□ 0.86
RAD9AQ99638 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.44■□□□□ 0.86
RAD9AQ99638 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAD9AQ99638 GPALPP1-207ENST00000611650 899 ntBASIC20.44■□□□□ 0.86
RAD9AQ99638 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.44■□□□□ 0.86
RAD9AQ99638 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.44■□□□□ 0.86
RAD9AQ99638 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.44■□□□□ 0.86
RAD9AQ99638 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAD9AQ99638 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAD9AQ99638 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAD9AQ99638 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RAD9AQ99638 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD9AQ99638 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD9AQ99638 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.43■□□□□ 0.86
RAD9AQ99638 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD9AQ99638 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD9AQ99638 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAD9AQ99638 GPAT2P1-201ENST00000444924 1672 ntBASIC20.43■□□□□ 0.86
RAD9AQ99638 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.43■□□□□ 0.86
RAD9AQ99638 TSPY19P-201ENST00000418461 509 ntBASIC20.43■□□□□ 0.86
RAD9AQ99638 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.43■□□□□ 0.86
RAD9AQ99638 TSPY18P-201ENST00000441642 509 ntBASIC20.43■□□□□ 0.86
RAD9AQ99638 EMBP1-201ENST00000458200 901 ntBASIC20.43■□□□□ 0.86
RAD9AQ99638 AC009078.2-202ENST00000463353 338 ntBASIC20.43■□□□□ 0.86
RAD9AQ99638 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.43■□□□□ 0.86
RAD9AQ99638 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.43■□□□□ 0.86
RAD9AQ99638 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.43■□□□□ 0.86
RAD9AQ99638 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.43■□□□□ 0.86
RAD9AQ99638 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.43■□□□□ 0.86
RAD9AQ99638 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD9AQ99638 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.43■□□□□ 0.86
RAD9AQ99638 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAD9AQ99638 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD9AQ99638 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.43■□□□□ 0.86
RAD9AQ99638 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD9AQ99638 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAD9AQ99638 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAD9AQ99638 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAD9AQ99638 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAD9AQ99638 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms