Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 LINC01711-201ENST00000598340 967 ntBASIC19.35■□□□□ 0.69
PHOX2BQ99453 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 HLA-A-209ENST00000638375 975 ntBASIC19.34■□□□□ 0.69
PHOX2BQ99453 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PHOX2BQ99453 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PHOX2BQ99453 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHOX2BQ99453 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PHOX2BQ99453 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PHOX2BQ99453 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PHOX2BQ99453 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.33■□□□□ 0.69
PHOX2BQ99453 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PHOX2BQ99453 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHOX2BQ99453 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHOX2BQ99453 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHOX2BQ99453 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.33■□□□□ 0.68
PHOX2BQ99453 AP000867.3-201ENST00000524675 377 ntBASIC19.33■□□□□ 0.68
PHOX2BQ99453 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.33■□□□□ 0.68
PHOX2BQ99453 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.33■□□□□ 0.68
PHOX2BQ99453 AC055717.3-201ENST00000622967 595 ntBASIC19.33■□□□□ 0.68
PHOX2BQ99453 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHOX2BQ99453 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PHOX2BQ99453 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PHOX2BQ99453 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.33■□□□□ 0.68
PHOX2BQ99453 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHOX2BQ99453 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.33■□□□□ 0.68
PHOX2BQ99453 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
PHOX2BQ99453 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHOX2BQ99453 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHOX2BQ99453 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PHOX2BQ99453 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.32■□□□□ 0.68
PHOX2BQ99453 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PHOX2BQ99453 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 TUBB8P6-201ENST00000436895 1288 ntBASIC19.32■□□□□ 0.68
PHOX2BQ99453 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.32■□□□□ 0.68
PHOX2BQ99453 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.32■□□□□ 0.68
PHOX2BQ99453 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.32■□□□□ 0.68
PHOX2BQ99453 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PHOX2BQ99453 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
PHOX2BQ99453 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.32■□□□□ 0.68
PHOX2BQ99453 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHOX2BQ99453 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHOX2BQ99453 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHOX2BQ99453 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms