Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H4Q96RI1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H4Q96RI1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H4Q96RI1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H4Q96RI1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NR1H4Q96RI1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H4Q96RI1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H4Q96RI1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H4Q96RI1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 AC134043.2-201ENST00000624206 2238 ntBASIC18.04■□□□□ 0.48
NR1H4Q96RI1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 MIR4767-201ENST00000582827 78 ntBASIC18.04■□□□□ 0.48
NR1H4Q96RI1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H4Q96RI1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 EEF1DP3-203ENST00000566025 782 ntBASIC18.03■□□□□ 0.48
NR1H4Q96RI1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NR1H4Q96RI1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.02■□□□□ 0.48
NR1H4Q96RI1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.02■□□□□ 0.47
NR1H4Q96RI1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NR1H4Q96RI1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NR1H4Q96RI1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NR1H4Q96RI1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NR1H4Q96RI1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
NR1H4Q96RI1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.01■□□□□ 0.47
NR1H4Q96RI1 AC245052.3-201ENST00000450182 901 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms