Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 AC026366.1-201ENST00000488803 879 ntBASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 KRT18P6-201ENST00000555540 1265 ntBASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HIST1H2AAQ96QV6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 NBPF21P-201ENST00000425093 1451 ntBASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H2AAQ96QV6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
HIST1H2AAQ96QV6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H2AAQ96QV6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H2AAQ96QV6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H2AAQ96QV6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIST1H2AAQ96QV6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.58■□□□□ 0.25
HIST1H2AAQ96QV6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 BX323043.1-201ENST00000641006 1765 ntBASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 AC018445.3-201ENST00000624177 1945 ntBASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST1H2AAQ96QV6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms