Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALPK3Q96L96 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALPK3Q96L96 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ALPK3Q96L96 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALPK3Q96L96 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALPK3Q96L96 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.91■□□□□ 0.94
ALPK3Q96L96 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ALPK3Q96L96 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.91■□□□□ 0.94
ALPK3Q96L96 AC010327.4-202ENST00000591484 748 ntBASIC20.91■□□□□ 0.94
ALPK3Q96L96 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.91■□□□□ 0.94
ALPK3Q96L96 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.91■□□□□ 0.94
ALPK3Q96L96 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ALPK3Q96L96 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALPK3Q96L96 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ALPK3Q96L96 LINC00565-201ENST00000562710 2331 ntBASIC20.91■□□□□ 0.94
ALPK3Q96L96 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.91■□□□□ 0.94
ALPK3Q96L96 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALPK3Q96L96 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.9■□□□□ 0.94
ALPK3Q96L96 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALPK3Q96L96 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ALPK3Q96L96 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ALPK3Q96L96 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.89■□□□□ 0.94
ALPK3Q96L96 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.89■□□□□ 0.93
ALPK3Q96L96 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
ALPK3Q96L96 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ALPK3Q96L96 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.89■□□□□ 0.93
ALPK3Q96L96 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ALPK3Q96L96 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ALPK3Q96L96 IGHV3-47-201ENST00000425060 335 ntBASIC20.89■□□□□ 0.93
ALPK3Q96L96 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ALPK3Q96L96 KRT18P67-201ENST00000432816 1264 ntBASIC20.89■□□□□ 0.93
ALPK3Q96L96 AC018712.1-201ENST00000455767 687 ntBASIC20.89■□□□□ 0.93
ALPK3Q96L96 AC106730.1-201ENST00000566722 1090 ntBASIC20.89■□□□□ 0.93
ALPK3Q96L96 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.89■□□□□ 0.93
ALPK3Q96L96 TERC-201ENST00000602385 541 ntBASIC20.89■□□□□ 0.93
ALPK3Q96L96 LINC02084-201ENST00000606069 1096 ntBASIC20.89■□□□□ 0.93
ALPK3Q96L96 AC055717.3-201ENST00000622967 595 ntBASIC20.89■□□□□ 0.93
ALPK3Q96L96 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ALPK3Q96L96 AC092720.2-201ENST00000602388 1665 ntBASIC20.89■□□□□ 0.93
ALPK3Q96L96 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ALPK3Q96L96 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.88■□□□□ 0.93
ALPK3Q96L96 AC091607.1-201ENST00000490318 1060 ntBASIC20.88■□□□□ 0.93
ALPK3Q96L96 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.88■□□□□ 0.93
ALPK3Q96L96 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.88■□□□□ 0.93
ALPK3Q96L96 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
ALPK3Q96L96 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.88■□□□□ 0.93
ALPK3Q96L96 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 AC006128.1-201ENST00000624704 1661 ntBASIC20.88■□□□□ 0.93
ALPK3Q96L96 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALPK3Q96L96 AL031284.1-201ENST00000419297 478 ntBASIC20.88■□□□□ 0.93
ALPK3Q96L96 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.88■□□□□ 0.93
ALPK3Q96L96 MIR3917-201ENST00000580971 93 ntBASIC20.88■□□□□ 0.93
ALPK3Q96L96 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.88■□□□□ 0.93
ALPK3Q96L96 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.88■□□□□ 0.93
ALPK3Q96L96 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.88■□□□□ 0.93
ALPK3Q96L96 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ALPK3Q96L96 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ALPK3Q96L96 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ALPK3Q96L96 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ALPK3Q96L96 NUS1P2-201ENST00000417358 873 ntBASIC20.87■□□□□ 0.93
ALPK3Q96L96 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms