Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 AC145285.6-201ENST00000604632 637 ntBASIC22.58■■□□□ 1.21
STAG1Q8WVM7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
STAG1Q8WVM7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.58■■□□□ 1.2
STAG1Q8WVM7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
STAG1Q8WVM7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
STAG1Q8WVM7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
STAG1Q8WVM7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
STAG1Q8WVM7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.58■■□□□ 1.2
STAG1Q8WVM7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 KRT18P21-201ENST00000515767 1272 ntBASIC22.57■■□□□ 1.2
STAG1Q8WVM7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 AC010947.1-201ENST00000623454 693 ntBASIC22.57■■□□□ 1.2
STAG1Q8WVM7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
STAG1Q8WVM7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 NAPSB-206ENST00000562112 1266 ntBASIC22.56■■□□□ 1.2
STAG1Q8WVM7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 IRX1P1-201ENST00000438849 1838 ntBASIC22.56■■□□□ 1.2
STAG1Q8WVM7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
STAG1Q8WVM7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 RCN1P1-201ENST00000400413 996 ntBASIC22.55■■□□□ 1.2
STAG1Q8WVM7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
STAG1Q8WVM7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 LINC01568-207ENST00000641790 1380 ntBASIC22.54■■□□□ 1.2
STAG1Q8WVM7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
STAG1Q8WVM7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms