Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
TRIM41Q8WV44 AC008040.2-201ENST00000461049 708 ntBASIC32.8■■■□□ 2.84
TRIM41Q8WV44 Z85996.1-201ENST00000494644 937 ntBASIC32.8■■■□□ 2.84
TRIM41Q8WV44 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
TRIM41Q8WV44 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC32.8■■■□□ 2.84
TRIM41Q8WV44 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
TRIM41Q8WV44 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC32.8■■■□□ 2.84
TRIM41Q8WV44 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC32.8■■■□□ 2.84
TRIM41Q8WV44 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC32.8■■■□□ 2.84
TRIM41Q8WV44 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC32.8■■■□□ 2.84
TRIM41Q8WV44 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
TRIM41Q8WV44 RCC2P6-201ENST00000526625 1557 ntBASIC32.79■■■□□ 2.84
TRIM41Q8WV44 MED17-221ENST00000639724 2317 ntTSL 5 BASIC32.79■■■□□ 2.84
TRIM41Q8WV44 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC32.79■■■□□ 2.84
TRIM41Q8WV44 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC32.79■■■□□ 2.84
TRIM41Q8WV44 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
TRIM41Q8WV44 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
TRIM41Q8WV44 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC32.79■■■□□ 2.84
TRIM41Q8WV44 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
TRIM41Q8WV44 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC32.79■■■□□ 2.84
TRIM41Q8WV44 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
TRIM41Q8WV44 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 EMBP1-201ENST00000458200 901 ntBASIC32.78■■■□□ 2.84
TRIM41Q8WV44 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC32.78■■■□□ 2.84
TRIM41Q8WV44 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 PKD1P6-201ENST00000343738 4769 ntBASIC32.77■■■□□ 2.84
TRIM41Q8WV44 PTPA-216ENST00000432651 857 ntTSL 2 BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 AC120114.3-201ENST00000611923 658 ntBASIC32.77■■■□□ 2.84
TRIM41Q8WV44 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC32.77■■■□□ 2.84
TRIM41Q8WV44 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC32.76■■■□□ 2.84
TRIM41Q8WV44 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
TRIM41Q8WV44 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC32.76■■■□□ 2.84
TRIM41Q8WV44 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
TRIM41Q8WV44 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC32.76■■■□□ 2.84
TRIM41Q8WV44 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC32.76■■■□□ 2.83
TRIM41Q8WV44 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC32.76■■■□□ 2.83
TRIM41Q8WV44 HOMER2P1-201ENST00000455653 964 ntBASIC32.76■■■□□ 2.83
TRIM41Q8WV44 AL160237.2-201ENST00000556165 472 ntBASIC32.76■■■□□ 2.83
TRIM41Q8WV44 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC32.76■■■□□ 2.83
TRIM41Q8WV44 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC32.76■■■□□ 2.83
TRIM41Q8WV44 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC32.76■■■□□ 2.83
TRIM41Q8WV44 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC32.76■■■□□ 2.83
TRIM41Q8WV44 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
TRIM41Q8WV44 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
TRIM41Q8WV44 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC32.76■■■□□ 2.83
TRIM41Q8WV44 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC32.76■■■□□ 2.83
TRIM41Q8WV44 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 GGCT-205ENST00000409436 954 ntTSL 3 BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 AL160286.2-201ENST00000567150 934 ntBASIC32.75■■■□□ 2.83
TRIM41Q8WV44 AP005242.2-201ENST00000580065 1175 ntBASIC32.75■■■□□ 2.83
TRIM41Q8WV44 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
TRIM41Q8WV44 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC32.74■■■□□ 2.83
TRIM41Q8WV44 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
TRIM41Q8WV44 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
TRIM41Q8WV44 ME2-218ENST00000640965 2476 ntTSL 5 BASIC32.74■■■□□ 2.83
TRIM41Q8WV44 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC32.74■■■□□ 2.83
TRIM41Q8WV44 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
TRIM41Q8WV44 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
TRIM41Q8WV44 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC32.74■■■□□ 2.83
TRIM41Q8WV44 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
TRIM41Q8WV44 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
TRIM41Q8WV44 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms