Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 AC092667.1-201ENST00000434301 2586 ntBASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
ZNF248Q8NDW4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.29■□□□□ 0.52
ZNF248Q8NDW4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 AL121603.2-201ENST00000557373 2117 ntBASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF248Q8NDW4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 KRT18P38-201ENST00000449496 1282 ntBASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 ZNF444P1-201ENST00000559497 298 ntBASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
ZNF248Q8NDW4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms