Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 AC141586.3-201ENST00000562166 1838 ntBASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 AC007952.6-201ENST00000573168 2673 ntBASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 AC003957.1-201ENST00000625108 2673 ntBASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 AC092338.2-201ENST00000568827 1415 ntBASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 LINC01568-207ENST00000641790 1380 ntBASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 C2orf69P3-201ENST00000565542 1120 ntBASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ARHGEF39Q8N4T4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ARHGEF39Q8N4T4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.08■□□□□ 0.49
ARHGEF39Q8N4T4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ARHGEF39Q8N4T4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.08■□□□□ 0.49
ARHGEF39Q8N4T4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.08■□□□□ 0.49
ARHGEF39Q8N4T4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ARHGEF39Q8N4T4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ARHGEF39Q8N4T4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 FAM87A-204ENST00000613235 858 ntBASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ARHGEF39Q8N4T4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 AC005332.7-201ENST00000614046 2005 ntBASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ARHGEF39Q8N4T4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms