Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 AC139887.4-201ENST00000607877 719 ntBASIC20.74■□□□□ 0.91
VPS52Q8N1B4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 AL138966.2-201ENST00000621997 464 ntBASIC20.74■□□□□ 0.91
VPS52Q8N1B4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS52Q8N1B4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 AC007663.1-201ENST00000438948 1240 ntBASIC20.73■□□□□ 0.91
VPS52Q8N1B4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
VPS52Q8N1B4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 AC010653.2-201ENST00000623505 997 ntBASIC20.72■□□□□ 0.91
VPS52Q8N1B4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS52Q8N1B4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 RNF152P1-201ENST00000397754 604 ntBASIC20.71■□□□□ 0.91
VPS52Q8N1B4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VPS52Q8N1B4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.7■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms