Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 MIR3652-201ENST00000579335 131 ntBASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 AC079781.3-201ENST00000449110 356 ntBASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 UNC93B7-201ENST00000509439 705 ntBASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 PRELID1P1-202ENST00000567272 903 ntBASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 MIR3180-5-201ENST00000583743 153 ntBASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.07■□□□□ 0.48
COL27A1Q8IZC6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 CHCHD2P8-201ENST00000429873 447 ntBASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 AL162741.1-201ENST00000565563 1558 ntBASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
COL27A1Q8IZC6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 AC012615.1-201ENST00000565797 1299 ntBASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 AL121672.3-201ENST00000608644 468 ntBASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 AL031008.1-201ENST00000619963 541 ntBASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL27A1Q8IZC6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 KRT17P6-201ENST00000453795 1220 ntBASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 BX276092.5-203ENST00000456199 560 ntBASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 AC092329.2-201ENST00000598402 547 ntBASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL27A1Q8IZC6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 RNF126P1-202ENST00000569893 925 ntBASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 AC024243.1-201ENST00000609234 778 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms