Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 FSCN1P1-201ENST00000568912 1481 ntBASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
CCDC146Q8IYE0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
CCDC146Q8IYE0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC146Q8IYE0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC146Q8IYE0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC146Q8IYE0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC146Q8IYE0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC146Q8IYE0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
CCDC146Q8IYE0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC25.39■■□□□ 1.66
CCDC146Q8IYE0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC146Q8IYE0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC25.39■■□□□ 1.65
CCDC146Q8IYE0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC146Q8IYE0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC25.39■■□□□ 1.65
CCDC146Q8IYE0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC146Q8IYE0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC146Q8IYE0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 AL161938.1-201ENST00000569833 2180 ntBASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 FAM207BP-201ENST00000447172 505 ntBASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC146Q8IYE0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 IRX1P1-201ENST00000438849 1838 ntBASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC25.37■■□□□ 1.65
CCDC146Q8IYE0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 AC087289.5-201ENST00000586076 3175 ntBASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CCDC146Q8IYE0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 AP000692.2-201ENST00000608391 879 ntBASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 KRT8P9-201ENST00000558927 1449 ntBASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 KRT17P2-201ENST00000300992 1314 ntBASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC25.35■■□□□ 1.65
CCDC146Q8IYE0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms