Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 UBE2SP1-201ENST00000450587 669 ntBASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 AC073195.1-201ENST00000607241 877 ntBASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 IRX1P1-201ENST00000438849 1838 ntBASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 KRT16P1-201ENST00000399124 1418 ntBASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 AL135905.2-201ENST00000584934 1404 ntBASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 FP475955.4-201ENST00000623131 1990 ntBASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC65Q8IXS2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 AC098818.2-201ENST00000564925 2320 ntBASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 CR392000.1-201ENST00000624770 1228 ntBASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC65Q8IXS2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 FEM1AP3-201ENST00000403722 1741 ntBASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC65Q8IXS2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC65Q8IXS2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC65Q8IXS2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms