Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCUBE3Q8IX30 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.14■□□□□ 0.82
SCUBE3Q8IX30 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 TSPY15P-201ENST00000457163 923 ntBASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SCUBE3Q8IX30 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCUBE3Q8IX30 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 KRT8P11-201ENST00000409686 1436 ntBASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 AC211429.1-201ENST00000415277 523 ntBASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 FAM207BP-201ENST00000447172 505 ntBASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 AL355075.4-201ENST00000554988 638 ntBASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 LINC01023-201ENST00000606054 436 ntBASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCUBE3Q8IX30 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 TSPY21P-201ENST00000433481 731 ntBASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 TSPY23P-201ENST00000440136 739 ntBASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 AP000692.2-201ENST00000608391 879 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms