Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC27.29■■□□□ 1.96
UBR1Q8IWV7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
UBR1Q8IWV7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
UBR1Q8IWV7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
UBR1Q8IWV7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
UBR1Q8IWV7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
UBR1Q8IWV7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
UBR1Q8IWV7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
UBR1Q8IWV7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 AC091304.2-201ENST00000564639 760 ntBASIC27.27■■□□□ 1.96
UBR1Q8IWV7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC27.27■■□□□ 1.96
UBR1Q8IWV7 AC233702.3-201ENST00000578656 1387 ntBASIC27.27■■□□□ 1.96
UBR1Q8IWV7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 AC026310.3-201ENST00000625186 2373 ntBASIC27.27■■□□□ 1.96
UBR1Q8IWV7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC27.27■■□□□ 1.96
UBR1Q8IWV7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC27.26■■□□□ 1.96
UBR1Q8IWV7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC27.26■■□□□ 1.95
UBR1Q8IWV7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
UBR1Q8IWV7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC27.26■■□□□ 1.95
UBR1Q8IWV7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
UBR1Q8IWV7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
UBR1Q8IWV7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
UBR1Q8IWV7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC27.26■■□□□ 1.95
UBR1Q8IWV7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC27.26■■□□□ 1.95
UBR1Q8IWV7 BX640515.1-201ENST00000617215 977 ntBASIC27.26■■□□□ 1.95
UBR1Q8IWV7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC27.26■■□□□ 1.95
UBR1Q8IWV7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC27.26■■□□□ 1.95
UBR1Q8IWV7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 PMS2P1-201ENST00000431037 1228 ntBASIC27.25■■□□□ 1.95
UBR1Q8IWV7 MCCD1P1-208ENST00000445732 328 ntBASIC27.25■■□□□ 1.95
UBR1Q8IWV7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 AC139530.3-201ENST00000620344 690 ntBASIC27.25■■□□□ 1.95
UBR1Q8IWV7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
UBR1Q8IWV7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC27.24■■□□□ 1.95
UBR1Q8IWV7 AL390719.2-201ENST00000606993 987 ntBASIC27.24■■□□□ 1.95
UBR1Q8IWV7 GAS2L1P1-201ENST00000420145 1480 ntBASIC27.24■■□□□ 1.95
UBR1Q8IWV7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms