Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ATP5G1P1-201ENST00000448724 379 ntBASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 AC010203.1-204ENST00000548782 407 ntBASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
SCN4BQ8IWT1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.2■□□□□ 0.83
SCN4BQ8IWT1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 PRSS44-201ENST00000515154 1146 ntBASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 AC010331.1-201ENST00000611423 582 ntBASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 FAM87A-204ENST00000613235 858 ntBASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
SCN4BQ8IWT1 AFG3L1P-217ENST00000557444 2447 ntBASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
SCN4BQ8IWT1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 AC007663.1-201ENST00000438948 1240 ntBASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCN4BQ8IWT1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 AL158211.5-201ENST00000623583 2518 ntBASIC20.17■□□□□ 0.82
SCN4BQ8IWT1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms