Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 COX11P1-201ENST00000489116 835 ntBASIC21.36■■□□□ 1.01
TRIM50Q86XT4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 AL023973.1-201ENST00000624619 620 ntBASIC21.36■■□□□ 1.01
TRIM50Q86XT4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM50Q86XT4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 RNF152P1-201ENST00000397754 604 ntBASIC21.35■■□□□ 1.01
TRIM50Q86XT4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 TSPY23P-201ENST00000440136 739 ntBASIC21.35■■□□□ 1.01
TRIM50Q86XT4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 AC011558.1-201ENST00000623459 338 ntBASIC21.35■■□□□ 1.01
TRIM50Q86XT4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.35■■□□□ 1.01
TRIM50Q86XT4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM50Q86XT4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 MIR4674-201ENST00000582457 87 ntBASIC21.34■■□□□ 1.01
TRIM50Q86XT4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TRIM50Q86XT4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 MYC-208ENST00000641036 567 ntBASIC21.33■■□□□ 1.01
TRIM50Q86XT4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM50Q86XT4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.33■■□□□ 1
TRIM50Q86XT4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM50Q86XT4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms