Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RNF111Q6ZNA4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF111Q6ZNA4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF111Q6ZNA4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
RNF111Q6ZNA4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF111Q6ZNA4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF111Q6ZNA4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF111Q6ZNA4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RNF111Q6ZNA4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF111Q6ZNA4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF111Q6ZNA4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 UNC93B4-201ENST00000505679 747 ntBASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 AP003097.1-201ENST00000530657 1135 ntBASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 AC067852.2-201ENST00000590513 2313 ntBASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 AL031598.1-201ENST00000561511 1773 ntBASIC18.58■□□□□ 0.56
RNF111Q6ZNA4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF111Q6ZNA4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 AC026366.1-201ENST00000488803 879 ntBASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 MIR4651-201ENST00000582622 73 ntBASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 AC008687.6-201ENST00000596318 630 ntBASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF111Q6ZNA4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms