Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
RFWD3Q6PCD5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 MMP23A-201ENST00000234610 1017 ntBASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 AC011298.2-201ENST00000617989 482 ntBASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 AC130371.2-201ENST00000619443 611 ntBASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 AC133561.5-201ENST00000635547 218 ntBASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFWD3Q6PCD5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 AC004951.3-201ENST00000418645 1148 ntBASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 AC091390.4-202ENST00000476426 537 ntBASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFWD3Q6PCD5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFWD3Q6PCD5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms