Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.53■■□□□ 1.04
CCDC62Q6P9F0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
CCDC62Q6P9F0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCDC62Q6P9F0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC62Q6P9F0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC62Q6P9F0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC62Q6P9F0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC62Q6P9F0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 AC092647.4-201ENST00000457211 535 ntBASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC62Q6P9F0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC62Q6P9F0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC62Q6P9F0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.52■■□□□ 1.03
CCDC62Q6P9F0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 TSPY23P-201ENST00000440136 739 ntBASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 HOMER2P1-201ENST00000455653 964 ntBASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 MIR4674-201ENST00000582457 87 ntBASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 AC091076.1-201ENST00000610741 619 ntBASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
CCDC62Q6P9F0 AC112907.3-201ENST00000577781 2400 ntBASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 SDHAP1-207ENST00000440850 2000 ntBASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 AC140113.3-201ENST00000605663 199 ntBASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 AC008622.2-201ENST00000617006 1229 ntBASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC62Q6P9F0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC62Q6P9F0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC62Q6P9F0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC62Q6P9F0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC62Q6P9F0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms