Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 HNRNPDP1-201ENST00000439535 754 ntBASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 AC138761.1-201ENST00000584393 385 ntBASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PRPF38BQ5VTL8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRPF38BQ5VTL8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PRPF38BQ5VTL8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PRPF38BQ5VTL8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.77■□□□□ 0.91
PRPF38BQ5VTL8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PRPF38BQ5VTL8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 POM121L3P-201ENST00000419331 1163 ntBASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 RPS2P1-201ENST00000434010 821 ntBASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 RNA5SP416-201ENST00000516838 111 ntBASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 AP002472.1-201ENST00000577490 586 ntBASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 AL591684.3-201ENST00000605187 298 ntBASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 Z83851.2-201ENST00000609564 659 ntBASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.76■□□□□ 0.91
PRPF38BQ5VTL8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 AF228730.6-201ENST00000641497 218 ntBASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 AC084121.3-201ENST00000641716 218 ntBASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 AC105233.6-201ENST00000642093 218 ntBASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRPF38BQ5VTL8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 AC022494.1-201ENST00000466044 728 ntBASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 DUX4L17-201ENST00000557360 1267 ntBASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 AC005332.3-201ENST00000589904 676 ntBASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.74■□□□□ 0.91
PRPF38BQ5VTL8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms