Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBR4Q5T4S7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBR4Q5T4S7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC10.51□□□□□ -0.73
UBR4Q5T4S7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC10.51□□□□□ -0.73
UBR4Q5T4S7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC10.51□□□□□ -0.73
UBR4Q5T4S7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC10.51□□□□□ -0.73
UBR4Q5T4S7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBR4Q5T4S7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC10.51□□□□□ -0.73
UBR4Q5T4S7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 AC093512.1-201ENST00000617969 520 ntBASIC10.5□□□□□ -0.73
UBR4Q5T4S7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 HCG4-201ENST00000418983 998 ntBASIC10.5□□□□□ -0.73
UBR4Q5T4S7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 MIR4525-201ENST00000580000 75 ntBASIC10.5□□□□□ -0.73
UBR4Q5T4S7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 TFP1-202ENST00000475455 1573 ntBASIC10.5□□□□□ -0.73
UBR4Q5T4S7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC10.5□□□□□ -0.73
UBR4Q5T4S7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 HIST2H3DP1-201ENST00000401004 416 ntBASIC10.49□□□□□ -0.73
UBR4Q5T4S7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 TBC1D3P2-202ENST00000577902 1649 ntBASIC10.49□□□□□ -0.73
UBR4Q5T4S7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 PRSS29P-201ENST00000440800 595 ntBASIC10.49□□□□□ -0.73
UBR4Q5T4S7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 AC090616.6-201ENST00000582640 721 ntBASIC10.49□□□□□ -0.73
UBR4Q5T4S7 AL390955.2-201ENST00000603032 514 ntBASIC10.49□□□□□ -0.73
UBR4Q5T4S7 AC025062.2-201ENST00000605477 670 ntBASIC10.49□□□□□ -0.73
UBR4Q5T4S7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 AP005018.1-201ENST00000525475 301 ntBASIC10.49□□□□□ -0.73
UBR4Q5T4S7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 AL355877.3-201ENST00000622820 899 ntBASIC10.49□□□□□ -0.73
UBR4Q5T4S7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 AL391807.1-203ENST00000604392 2365 ntBASIC10.49□□□□□ -0.73
UBR4Q5T4S7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
UBR4Q5T4S7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms