Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 BICD1-207ENST00000551848 1962 ntBASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.07■□□□□ 0.48
LRIF1Q5T3J3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 SLC29A4P1-201ENST00000398760 971 ntBASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 AC007613.1-201ENST00000572811 2597 ntBASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.06■□□□□ 0.48
LRIF1Q5T3J3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 NCF1B-203ENST00000435988 1254 ntBASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 ANO7L1-203ENST00000602586 1720 ntBASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRIF1Q5T3J3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.04■□□□□ 0.48
LRIF1Q5T3J3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIF1Q5T3J3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIF1Q5T3J3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIF1Q5T3J3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.03■□□□□ 0.48
LRIF1Q5T3J3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
LRIF1Q5T3J3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.03■□□□□ 0.48
LRIF1Q5T3J3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIF1Q5T3J3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRIF1Q5T3J3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRIF1Q5T3J3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms