Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22■■□□□ 1.11
USH1GQ495M9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22■■□□□ 1.11
USH1GQ495M9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22■■□□□ 1.11
USH1GQ495M9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
USH1GQ495M9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
USH1GQ495M9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22■■□□□ 1.11
USH1GQ495M9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
USH1GQ495M9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
USH1GQ495M9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
USH1GQ495M9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.99■■□□□ 1.11
USH1GQ495M9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.99■■□□□ 1.11
USH1GQ495M9 TSPY17P-201ENST00000450329 467 ntBASIC21.99■■□□□ 1.11
USH1GQ495M9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.99■■□□□ 1.11
USH1GQ495M9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.99■■□□□ 1.11
USH1GQ495M9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
USH1GQ495M9 AL353719.1-201ENST00000566847 864 ntBASIC21.99■■□□□ 1.11
USH1GQ495M9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USH1GQ495M9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
USH1GQ495M9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USH1GQ495M9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
USH1GQ495M9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
USH1GQ495M9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.98■■□□□ 1.11
USH1GQ495M9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.98■■□□□ 1.11
USH1GQ495M9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
USH1GQ495M9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USH1GQ495M9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
USH1GQ495M9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.98■■□□□ 1.11
USH1GQ495M9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USH1GQ495M9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.98■■□□□ 1.11
USH1GQ495M9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.98■■□□□ 1.11
USH1GQ495M9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.98■■□□□ 1.11
USH1GQ495M9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USH1GQ495M9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USH1GQ495M9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
USH1GQ495M9 AC104076.2-201ENST00000448912 469 ntBASIC21.98■■□□□ 1.11
USH1GQ495M9 CA15P1-201ENST00000481698 905 ntBASIC21.98■■□□□ 1.11
USH1GQ495M9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.98■■□□□ 1.11
USH1GQ495M9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USH1GQ495M9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USH1GQ495M9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.98■■□□□ 1.11
USH1GQ495M9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
USH1GQ495M9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.97■■□□□ 1.11
USH1GQ495M9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
USH1GQ495M9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
USH1GQ495M9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.97■■□□□ 1.11
USH1GQ495M9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 Z82202.1-201ENST00000623446 1880 ntBASIC21.97■■□□□ 1.11
USH1GQ495M9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.97■■□□□ 1.11
USH1GQ495M9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.97■■□□□ 1.11
USH1GQ495M9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.97■■□□□ 1.11
USH1GQ495M9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.97■■□□□ 1.11
USH1GQ495M9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 AP003041.3-201ENST00000527151 707 ntBASIC21.97■■□□□ 1.11
USH1GQ495M9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.97■■□□□ 1.11
USH1GQ495M9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.97■■□□□ 1.11
USH1GQ495M9 AC006011.2-201ENST00000621313 1158 ntBASIC21.97■■□□□ 1.11
USH1GQ495M9 AC010653.2-201ENST00000623505 997 ntBASIC21.97■■□□□ 1.11
USH1GQ495M9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
USH1GQ495M9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.97■■□□□ 1.11
USH1GQ495M9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
USH1GQ495M9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USH1GQ495M9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
USH1GQ495M9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USH1GQ495M9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USH1GQ495M9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
USH1GQ495M9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
USH1GQ495M9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USH1GQ495M9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.96■■□□□ 1.11
USH1GQ495M9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
USH1GQ495M9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.96■■□□□ 1.11
USH1GQ495M9 AL445228.2-201ENST00000605589 952 ntBASIC21.96■■□□□ 1.11
USH1GQ495M9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
USH1GQ495M9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
USH1GQ495M9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USH1GQ495M9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms