Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 AC104076.2-201ENST00000448912 469 ntBASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 KRT18P16-201ENST00000510337 1294 ntBASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 TMEM179-206ENST00000616017 1645 ntBASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC144BQ3MJ40 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 PRR31-201ENST00000371629 978 ntTSL 2 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 AC004980.1-204ENST00000429707 299 ntBASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 AC010203.1-204ENST00000548782 407 ntBASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 AP005242.2-201ENST00000580065 1175 ntBASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 EML3-217ENST00000531557 2509 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC144BQ3MJ40 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 TUBB8P6-201ENST00000436895 1288 ntBASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 DUX4L26-201ENST00000489078 1255 ntBASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 C2orf69P3-201ENST00000565542 1120 ntBASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 DGCR10-201ENST00000609839 495 ntBASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC144BQ3MJ40 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CCDC144BQ3MJ40 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC144BQ3MJ40 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC144BQ3MJ40 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC144BQ3MJ40 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.19■■□□□ 1.14
CCDC144BQ3MJ40 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC144BQ3MJ40 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC144BQ3MJ40 ECEL1P2-202ENST00000465689 757 ntBASIC22.19■■□□□ 1.14
CCDC144BQ3MJ40 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.19■■□□□ 1.14
CCDC144BQ3MJ40 AC097488.1-201ENST00000507834 756 ntBASIC22.19■■□□□ 1.14
CCDC144BQ3MJ40 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.19■■□□□ 1.14
CCDC144BQ3MJ40 EGLN1P1-201ENST00000531623 762 ntBASIC22.19■■□□□ 1.14
CCDC144BQ3MJ40 AC131212.4-201ENST00000623606 975 ntBASIC22.19■■□□□ 1.14
CCDC144BQ3MJ40 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms