Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.19■■□□□ 1.3
RFX7Q2KHR2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.19■■□□□ 1.3
RFX7Q2KHR2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 FAM207BP-201ENST00000447172 505 ntBASIC23.18■■□□□ 1.3
RFX7Q2KHR2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 AL590326.2-201ENST00000625139 305 ntBASIC23.18■■□□□ 1.3
RFX7Q2KHR2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFX7Q2KHR2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 AC104076.2-201ENST00000448912 469 ntBASIC23.17■■□□□ 1.3
RFX7Q2KHR2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 SLC25A1P4-201ENST00000567977 778 ntBASIC23.17■■□□□ 1.3
RFX7Q2KHR2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.17■■□□□ 1.3
RFX7Q2KHR2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.16■■□□□ 1.3
RFX7Q2KHR2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.16■■□□□ 1.3
RFX7Q2KHR2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RFX7Q2KHR2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFX7Q2KHR2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFX7Q2KHR2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFX7Q2KHR2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.14■■□□□ 1.3
RFX7Q2KHR2 PRSS44-201ENST00000515154 1146 ntBASIC23.14■■□□□ 1.3
RFX7Q2KHR2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
RFX7Q2KHR2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFX7Q2KHR2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms