Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 LINC00167-201ENST00000530583 1419 ntBASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO4Q2I0M5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 KRT8P41-201ENST00000533985 1514 ntBASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 AL031284.1-201ENST00000419297 478 ntBASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO4Q2I0M5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 FAM197Y8-203ENST00000450145 560 ntBASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 AF238378.1-201ENST00000526806 358 ntBASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 LINC01465-201ENST00000408887 1940 ntBASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 AC005229.4-201ENST00000610085 2198 ntBASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RSPO4Q2I0M5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 AC093909.1-201ENST00000504731 1122 ntBASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 REXO1L6P-202ENST00000619970 1078 ntBASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 AC079602.3-201ENST00000623931 403 ntBASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.53■□□□□ 0.56
RSPO4Q2I0M5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 MIR662-201ENST00000384847 95 ntBASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms