Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL20P78556 RBM17P2-201ENST00000616397 1405 ntBASIC15.09■□□□□ 0.01
CCL20P78556 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL20P78556 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCL20P78556 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCL20P78556 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCL20P78556 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL20P78556 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.09■□□□□ 0.01
CCL20P78556 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.09■□□□□ 0.01
CCL20P78556 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
CCL20P78556 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 AC243732.1-201ENST00000612648 864 ntBASIC15.09■□□□□ 0.01
CCL20P78556 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.09■□□□□ 0.01
CCL20P78556 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCL20P78556 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.09■□□□□ 0.01
CCL20P78556 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCL20P78556 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.09■□□□□ 0.01
CCL20P78556 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCL20P78556 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCL20P78556 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCL20P78556 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCL20P78556 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CCL20P78556 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCL20P78556 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCL20P78556 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 AC079140.4-201ENST00000507448 529 ntBASIC15.08■□□□□ 0
CCL20P78556 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.08■□□□□ 0
CCL20P78556 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCL20P78556 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 TPRG1LP1-201ENST00000598702 760 ntBASIC15.08■□□□□ 0
CCL20P78556 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 AL355001.2-201ENST00000620617 1191 ntBASIC15.08■□□□□ 0
CCL20P78556 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.08■□□□□ 0
CCL20P78556 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.08■□□□□ 0
CCL20P78556 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.08■□□□□ 0
CCL20P78556 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCL20P78556 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CCL20P78556 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
CCL20P78556 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.07■□□□□ 0
CCL20P78556 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.07■□□□□ 0
CCL20P78556 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.07■□□□□ 0
CCL20P78556 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.07■□□□□ 0
CCL20P78556 ZNF815P-204ENST00000434898 1737 ntBASIC15.07■□□□□ 0
CCL20P78556 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CCL20P78556 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.07■□□□□ 0
CCL20P78556 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.07■□□□□ 0
CCL20P78556 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.07■□□□□ 0
CCL20P78556 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.07■□□□□ 0
CCL20P78556 GNAS-203ENST00000306120 1878 ntBASIC15.07■□□□□ 0
CCL20P78556 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCL20P78556 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
CCL20P78556 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CCL20P78556 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.07■□□□□ 0
CCL20P78556 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCL20P78556 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.07■□□□□ 0
CCL20P78556 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.07■□□□□ 0
CCL20P78556 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.07■□□□□ 0
CCL20P78556 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms