Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NKX6-1P78426 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NKX6-1P78426 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NKX6-1P78426 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 KRT16P1-201ENST00000399124 1418 ntBASIC16.85■□□□□ 0.29
NKX6-1P78426 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NKX6-1P78426 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NKX6-1P78426 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NKX6-1P78426 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
NKX6-1P78426 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
NKX6-1P78426 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX6-1P78426 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX6-1P78426 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX6-1P78426 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX6-1P78426 NIFKP9-201ENST00000419265 221 ntBASIC16.84■□□□□ 0.29
NKX6-1P78426 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.84■□□□□ 0.29
NKX6-1P78426 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.84■□□□□ 0.29
NKX6-1P78426 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX6-1P78426 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX6-1P78426 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.84■□□□□ 0.29
NKX6-1P78426 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.84■□□□□ 0.29
NKX6-1P78426 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NKX6-1P78426 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NKX6-1P78426 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NKX6-1P78426 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NKX6-1P78426 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NKX6-1P78426 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.84■□□□□ 0.29
NKX6-1P78426 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX6-1P78426 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NKX6-1P78426 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.83■□□□□ 0.28
NKX6-1P78426 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NKX6-1P78426 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.83■□□□□ 0.28
NKX6-1P78426 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.83■□□□□ 0.28
NKX6-1P78426 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX6-1P78426 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX6-1P78426 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX6-1P78426 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NKX6-1P78426 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.83■□□□□ 0.28
NKX6-1P78426 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX6-1P78426 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.83■□□□□ 0.28
NKX6-1P78426 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.83■□□□□ 0.28
NKX6-1P78426 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NKX6-1P78426 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX6-1P78426 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
NKX6-1P78426 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX6-1P78426 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.82■□□□□ 0.28
NKX6-1P78426 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX6-1P78426 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.82■□□□□ 0.28
NKX6-1P78426 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NKX6-1P78426 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX6-1P78426 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX6-1P78426 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.82■□□□□ 0.28
NKX6-1P78426 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX6-1P78426 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
NKX6-1P78426 WWOX-216ENST00000569818 525 ntBASIC16.82■□□□□ 0.28
NKX6-1P78426 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.82■□□□□ 0.28
NKX6-1P78426 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX6-1P78426 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms